Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm28659-201ENSMUST00000188013 759 ntBASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm3854A0A1B0GSS6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm3854A0A1B0GSS6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm3854A0A1B0GSS6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm3854A0A1B0GSS6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm3854A0A1B0GSS6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm3854A0A1B0GSS6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm12895-201ENSMUST00000122214 226 ntBASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm5864-201ENSMUST00000202263 970 ntBASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm3854A0A1B0GSS6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm3854A0A1B0GSS6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm43347-201ENSMUST00000200226 580 ntBASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm3854A0A1B0GSS6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Gm27459-201ENSMUST00000184860 107 ntBASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3854A0A1B0GSS6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms