Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm38027-201ENSMUST00000192315 235 ntBASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm10231-201ENSMUST00000181584 441 ntBASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm10175-202ENSMUST00000208752 441 ntBASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 183.3 ms