Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms