Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 AC160393.1-201ENSMUST00000218378 1279 ntBASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-28A0A0G2JE47 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm43173-201ENSMUST00000202246 593 ntBASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm6139-201ENSMUST00000079261 882 ntBASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-28A0A0G2JE47 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.65□□□□□ -0.71
Igkv8-28A0A0G2JE47 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm22325-201ENSMUST00000158904 308 ntBASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm43060-201ENSMUST00000200621 289 ntBASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms