Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv5A0A0B4J1G9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv5A0A0B4J1G9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Gm21956-201ENSMUST00000179946 522 ntBASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv5A0A0B4J1G9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv5A0A0B4J1G9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Gm9988-201ENSMUST00000069786 435 ntBASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv5A0A0B4J1G9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Reep4-203ENSMUST00000226563 1444 ntBASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms