Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-59A0A0A6YXE0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-59A0A0A6YXE0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms