Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm12527-201ENSMUST00000117967 564 ntBASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm17661-201ENSMUST00000170317 270 ntBASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Trmt13-210ENSMUST00000198454 880 ntBASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm27275-201ENSMUST00000184318 272 ntBASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm37025-201ENSMUST00000195159 829 ntBASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.42□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ighv3-3A0A0A6YWL2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms