Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.51□□□□□ -0.25
Trav17A0A075B655 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav17A0A075B655 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav17A0A075B655 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.49□□□□□ -0.25
Trav17A0A075B655 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav17A0A075B655 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Gm11927-201ENSMUST00000118472 759 ntBASIC13.48□□□□□ -0.25
Trav17A0A075B655 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms