Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Mir6538-201ENSMUST00000183713 110 ntBASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-4A0A075B654 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-4A0A075B654 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-4A0A075B654 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-4A0A075B654 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms