Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Gm26524-201ENSMUST00000192339 390 ntBASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-2-dv6-2A0A075B650 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mir6349-201ENSMUST00000184059 97 ntBASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-2-dv6-2A0A075B650 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms