Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.23□□□□□ -0.45
Trav8-1A0A075B641 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm27801-201ENSMUST00000184174 223 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav8-1A0A075B641 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Gm13216-201ENSMUST00000117145 591 ntBASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8-1A0A075B641 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8-1A0A075B641 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms