Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-7-dv9A0A075B639 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Mir1199-201ENSMUST00000117015 119 ntBASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Gm13216-201ENSMUST00000117145 591 ntBASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-7-dv9A0A075B639 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Gm12085-201ENSMUST00000119263 940 ntBASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Il3ra-202ENSMUST00000223589 738 ntBASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-7-dv9A0A075B639 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav6-7-dv9A0A075B639 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm7638-201ENSMUST00000121348 967 ntBASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm16042-201ENSMUST00000204813 1247 ntBASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 AC153881.1-201ENSMUST00000214448 284 ntBASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Gm15743-202ENSMUST00000182690 1901 ntBASIC15□□□□□ -0.01
Trav6-7-dv9A0A075B639 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-7-dv9A0A075B639 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms