Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav16d-dv11A0A075B617 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm10418-201ENSMUST00000100943 576 ntBASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav16d-dv11A0A075B617 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav16d-dv11A0A075B617 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav16d-dv11A0A075B617 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav16d-dv11A0A075B617 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms