Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav9-1A0A075B601 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Gm37292-201ENSMUST00000192062 758 ntBASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-1A0A075B601 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Gm37856-201ENSMUST00000191634 999 ntBASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Trmt13-210ENSMUST00000198454 880 ntBASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9-1A0A075B601 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gm10517-202ENSMUST00000192970 758 ntBASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gm4974-201ENSMUST00000209974 875 ntBASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.24□□□□□ -0.29
Trav9-1A0A075B601 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.23□□□□□ -0.29
Trav9-1A0A075B601 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms