Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav6-1A0A075B5Z8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav6-1A0A075B5Z8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav6-1A0A075B5Z8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Mir5133-201ENSMUST00000174955 77 ntBASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm2559-201ENSMUST00000201323 363 ntBASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-1A0A075B5Z8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-1A0A075B5Z8 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-1A0A075B5Z8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-1A0A075B5Z8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms