Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav5-1A0A075B5Z7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-1A0A075B5Z7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-1A0A075B5Z7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-1A0A075B5Z7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm5587-201ENSMUST00000206270 674 ntBASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav5-1A0A075B5Z7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms