Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Gm18958-201ENSMUST00000174258 762 ntBASIC17■□□□□ 0.31
Trbv4A0A075B5I2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Gm36858-201ENSMUST00000194501 2391 ntBASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv4A0A075B5I2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv4A0A075B5I2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv4A0A075B5I2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms