Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Gm26004-201ENSMUST00000158804 116 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Gm27527-201ENSMUST00000183903 99 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.68□□□□□ -1.98
Clp1Q99LI9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.68□□□□□ -1.98
Clp1Q99LI9 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm15289-201ENSMUST00000117793 244 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm15536-201ENSMUST00000121411 114 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm24916-201ENSMUST00000157287 79 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm24656-201ENSMUST00000177548 132 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm7258-201ENSMUST00000179317 300 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.67□□□□□ -1.98
Clp1Q99LI9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Clp1Q99LI9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Clp1Q99LI9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.66□□□□□ -1.98
Clp1Q99LI9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm16171-201ENSMUST00000118004 324 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm13433-201ENSMUST00000121701 240 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm23434-201ENSMUST00000157179 100 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm22079-201ENSMUST00000157592 106 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm23181-201ENSMUST00000158685 110 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm24345-201ENSMUST00000158706 124 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm26864-201ENSMUST00000181346 156 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm22743-201ENSMUST00000083445 133 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm25006-201ENSMUST00000083813 107 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Clp1Q99LI9 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.66□□□□□ -1.98
Clp1Q99LI9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.65□□□□□ -1.99
Clp1Q99LI9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.65□□□□□ -1.99
Clp1Q99LI9 Gm23253-201ENSMUST00000157441 104 ntBASIC2.65□□□□□ -1.99
Clp1Q99LI9 Snord53-201ENSMUST00000175146 78 ntBASIC2.65□□□□□ -1.99
Clp1Q99LI9 Mir669j-201ENSMUST00000179023 121 ntBASIC2.65□□□□□ -1.99
Clp1Q99LI9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.65□□□□□ -1.99
Clp1Q99LI9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Clp1Q99LI9 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Clp1Q99LI9 Gm22545-201ENSMUST00000104350 132 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Gm23847-201ENSMUST00000083829 110 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Gm24030-201ENSMUST00000083931 164 ntBASIC2.64□□□□□ -1.99
Clp1Q99LI9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Clp1Q99LI9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Clp1Q99LI9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm22796-201ENSMUST00000157234 106 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm23409-201ENSMUST00000158516 237 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm22888-201ENSMUST00000158640 77 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm24842-201ENSMUST00000158681 54 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Mir6419-201ENSMUST00000184784 113 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.63□□□□□ -1.99
Clp1Q99LI9 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.62□□□□□ -1.99
Clp1Q99LI9 Snord64-201ENSMUST00000104003 67 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm23048-201ENSMUST00000157237 129 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm22558-201ENSMUST00000157326 95 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm25910-201ENSMUST00000157620 140 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm27722-201ENSMUST00000183908 76 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Clp1Q99LI9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.62□□□□□ -1.99
Clp1Q99LI9 Mir880-201ENSMUST00000104809 78 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Gm26073-201ENSMUST00000179906 127 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Snora20-201ENSMUST00000082703 128 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Mir107-201ENSMUST00000083660 87 ntBASIC2.61□□□□□ -1.99
Clp1Q99LI9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm22999-201ENSMUST00000157082 88 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm24250-201ENSMUST00000157320 135 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm25367-201ENSMUST00000158846 106 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Snord87-201ENSMUST00000175437 87 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm23770-201ENSMUST00000178009 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm22832-201ENSMUST00000178022 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm23863-201ENSMUST00000178265 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm24828-201ENSMUST00000178507 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm23052-201ENSMUST00000178633 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm25729-201ENSMUST00000179050 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm25359-201ENSMUST00000179315 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm22624-201ENSMUST00000179913 108 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm27446-201ENSMUST00000183963 89 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm27330-201ENSMUST00000184689 132 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.6□□□□□ -1.99
Clp1Q99LI9 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm25855-201ENSMUST00000082787 72 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms