Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LIMK2P53671 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LIMK2P53671 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK2P53671 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LIMK2P53671 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIMK2P53671 MTCO1P28-201ENST00000574177 1528 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
LIMK2P53671 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK2P53671 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 KYNUP3-201ENST00000574386 1341 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AL161756.3-201ENST00000641216 2071 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK2P53671 RNU105B-201ENST00000364478 208 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.04□□□□□ -1.44
LIMK2P53671 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AC130360.1-201ENST00000425489 1117 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 NAP1L4P2-201ENST00000425958 899 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LIMK2P53671 ATP5LP2-201ENST00000440646 311 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AL136455.1-201ENST00000441083 1240 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.04□□□□□ -1.44
LIMK2P53671 AC084754.1-201ENST00000463466 464 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AC098847.1-201ENST00000473094 348 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AC025458.1-201ENST00000506046 166 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 snoU109.5-201ENST00000516231 132 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.04□□□□□ -1.44
LIMK2P53671 AC130365.2-201ENST00000525882 1201 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AP003080.1-202ENST00000526526 915 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.04□□□□□ -1.44
LIMK2P53671 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.04□□□□□ -1.44
LIMK2P53671 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.04□□□□□ -1.44
LIMK2P53671 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK2P53671 AC093388.1-201ENST00000609166 430 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AC129778.1-202ENST00000623812 261 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK2P53671 AL591379.1-207ENST00000635982 261 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.04□□□□□ -1.44
LIMK2P53671 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK2P53671 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK2P53671 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
LIMK2P53671 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK2P53671 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK2P53671 MSL3P1-202ENST00000440028 1468 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 EIF3EP1-201ENST00000433978 1316 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LIMK2P53671 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK2P53671 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 AC023490.2-201ENST00000359859 470 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 RNA5SP514-201ENST00000363717 111 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 MIR130B-202ENST00000385018 82 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 MYL6P5-201ENST00000412707 459 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 AC066692.1-201ENST00000421721 457 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 BTG3P1-201ENST00000435859 716 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.03□□□□□ -1.44
LIMK2P53671 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK2P53671 AC093719.1-201ENST00000480427 441 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 IGKV2-19-201ENST00000518132 283 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.03□□□□□ -1.44
LIMK2P53671 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.03□□□□□ -1.44
LIMK2P53671 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.03□□□□□ -1.44
LIMK2P53671 LINC00556-201ENST00000569603 412 ntBASIC6.03□□□□□ -1.44
LIMK2P53671 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.03□□□□□ -1.44
LIMK2P53671 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.03□□□□□ -1.44
LIMK2P53671 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms