Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 AL136984.1-201ENST00000607611 1893 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC068769.1-201ENST00000474767 2426 ntBASIC6.21□□□□□ -1.41
LIMK1P53667 AC097063.1-201ENST00000426714 1797 ntBASIC6.21□□□□□ -1.41
LIMK1P53667 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.21□□□□□ -1.41
LIMK1P53667 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LIMK1P53667 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.21□□□□□ -1.41
LIMK1P53667 AL161912.4-201ENST00000623889 2468 ntBASIC6.21□□□□□ -1.41
LIMK1P53667 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.21□□□□□ -1.41
LIMK1P53667 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
LIMK1P53667 TNPO1P2-201ENST00000426249 2665 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.21□□□□□ -1.42
LIMK1P53667 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 RNA5SP65-201ENST00000363166 119 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 AL049697.3-201ENST00000406493 982 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 MIR1203-201ENST00000408812 85 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 AL355433.1-201ENST00000422804 300 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 RPS27P18-201ENST00000431701 247 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 H3F3BP1-201ENST00000440551 403 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 YWHAEP1-201ENST00000453697 763 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 RN7SL799P-201ENST00000475891 298 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 RN7SL326P-201ENST00000477493 296 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC117395.1-201ENST00000487390 403 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 RPL32P9-201ENST00000487963 407 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 HMGB3P14-201ENST00000494195 599 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 AC114781.3-201ENST00000512083 142 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 RNU6-943P-201ENST00000516960 98 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.21□□□□□ -1.42
LIMK1P53667 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.21□□□□□ -1.42
LIMK1P53667 AP005639.1-201ENST00000526939 192 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 AP000619.2-201ENST00000546014 969 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 ZNF322P1-201ENST00000568013 1209 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 RN7SL475P-201ENST00000583379 298 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC020916.2-201ENST00000591242 360 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC091193.1-201ENST00000604640 448 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 MIR6793-201ENST00000612376 63 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 NF1P10-201ENST00000613227 742 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 AC010333.3-201ENST00000615100 402 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.21□□□□□ -1.42
LIMK1P53667 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 AC008627.1-201ENST00000517511 1704 ntBASIC6.21□□□□□ -1.42
LIMK1P53667 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LIMK1P53667 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
LIMK1P53667 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LIMK1P53667 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LIMK1P53667 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC007485.2-201ENST00000623493 1667 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC106872.5-201ENST00000508856 1416 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 SNORA21-201ENST00000362423 132 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 RNA5SP346-201ENST00000363541 121 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 MTND4LP21-201ENST00000415303 295 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 RPL23AP18-201ENST00000416139 468 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 OR5W1P-201ENST00000423705 938 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 TRGV7-201ENST00000427089 353 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 AC245452.2-201ENST00000435222 392 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC005077.1-201ENST00000449226 375 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 AL133351.3-201ENST00000454998 193 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 RPL17P2-201ENST00000491913 451 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 RFPL4AP3-201ENST00000515267 345 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 RNA5SP34-201ENST00000516887 130 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms