Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.5□□□□□ -1.37
TPM1P09493 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.5□□□□□ -1.37
TPM1P09493 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM1P09493 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM1P09493 AC021269.1-201ENST00000526860 705 ntBASIC6.5□□□□□ -1.37
TPM1P09493 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM1P09493 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 AC006120.1-201ENST00000579375 546 ntBASIC6.5□□□□□ -1.37
TPM1P09493 AC023389.2-201ENST00000580031 955 ntBASIC6.5□□□□□ -1.37
TPM1P09493 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 Z93930.3-201ENST00000607919 749 ntBASIC6.5□□□□□ -1.37
TPM1P09493 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 AC015712.7-201ENST00000615211 635 ntBASIC6.5□□□□□ -1.37
TPM1P09493 AL445670.1-201ENST00000618889 801 ntBASIC6.5□□□□□ -1.37
TPM1P09493 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
TPM1P09493 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 XKRY2-202ENST00000623874 1581 ntBASIC6.49□□□□□ -1.37
TPM1P09493 XKRY-202ENST00000624960 1581 ntBASIC6.49□□□□□ -1.37
TPM1P09493 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 RNA5SP211-201ENST00000365516 117 ntBASIC6.49□□□□□ -1.37
TPM1P09493 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TPM1P09493 AL157702.1-201ENST00000398764 426 ntBASIC6.49□□□□□ -1.37
TPM1P09493 NACAP7-201ENST00000407371 609 ntBASIC6.49□□□□□ -1.37
TPM1P09493 UBTFL2-201ENST00000411859 1191 ntBASIC6.49□□□□□ -1.37
TPM1P09493 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM1P09493 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM1P09493 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM1P09493 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM1P09493 RPL31P11-202ENST00000454082 372 ntBASIC6.49□□□□□ -1.37
TPM1P09493 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM1P09493 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM1P09493 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM1P09493 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM1P09493 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM1P09493 TDGP1-201ENST00000543961 1229 ntBASIC6.49□□□□□ -1.37
TPM1P09493 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 AL512430.4-201ENST00000603085 613 ntBASIC6.49□□□□□ -1.37
TPM1P09493 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 AC002525.1-201ENST00000624392 1622 ntBASIC6.49□□□□□ -1.37
TPM1P09493 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 AC006484.1-201ENST00000435086 1884 ntBASIC6.49□□□□□ -1.37
TPM1P09493 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TPM1P09493 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 EIF3EP1-201ENST00000433978 1316 ntBASIC6.49□□□□□ -1.37
TPM1P09493 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM1P09493 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
TPM1P09493 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 TCP11X1-202ENST00000622971 1372 ntBASIC6.48□□□□□ -1.37
TPM1P09493 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
TPM1P09493 RPL11P4-201ENST00000332269 436 ntBASIC6.48□□□□□ -1.37
TPM1P09493 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TPM1P09493 MIR27A-201ENST00000385073 78 ntBASIC6.48□□□□□ -1.37
TPM1P09493 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.48□□□□□ -1.37
TPM1P09493 MTND2P12-201ENST00000417560 1252 ntBASIC6.48□□□□□ -1.37
TPM1P09493 RPL35AP31-201ENST00000418340 337 ntBASIC6.48□□□□□ -1.37
TPM1P09493 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AC099677.3-201ENST00000427081 395 ntBASIC6.48□□□□□ -1.37
TPM1P09493 AC096632.2-201ENST00000438139 1239 ntBASIC6.48□□□□□ -1.37
TPM1P09493 AL663074.2-201ENST00000440621 479 ntBASIC6.48□□□□□ -1.37
TPM1P09493 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 RPL12P39-201ENST00000455456 496 ntBASIC6.48□□□□□ -1.37
TPM1P09493 RPS26P24-201ENST00000497656 331 ntBASIC6.48□□□□□ -1.37
TPM1P09493 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.48□□□□□ -1.37
TPM1P09493 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.48□□□□□ -1.37
TPM1P09493 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.48□□□□□ -1.37
TPM1P09493 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.48□□□□□ -1.37
TPM1P09493 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM1P09493 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.48□□□□□ -1.37
TPM1P09493 AC096861.1-201ENST00000616652 240 ntBASIC6.48□□□□□ -1.37
TPM1P09493 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TPM1P09493 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM1P09493 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TPM1P09493 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.48□□□□□ -1.37
TPM1P09493 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms