Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trim47Q8C0E3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Mir499-201ENSMUST00000102357 79 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm25485-201ENSMUST00000104120 132 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm22672-201ENSMUST00000104414 134 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm23838-201ENSMUST00000158067 162 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm26215-201ENSMUST00000158584 139 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Traj61-201ENSMUST00000165025 72 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm20409-201ENSMUST00000173457 130 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Mir3103-201ENSMUST00000175474 67 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm44399-201ENSMUST00000205043 226 ntBASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim47Q8C0E3 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.28□□□□□ -1.89
Trim47Q8C0E3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm23011-201ENSMUST00000104148 132 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Mir5123-201ENSMUST00000177794 83 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm30534-201ENSMUST00000217928 207 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm26441-201ENSMUST00000082590 104 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm23246-201ENSMUST00000083371 67 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim47Q8C0E3 Gm23911-201ENSMUST00000104596 134 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Gm25061-201ENSMUST00000104665 107 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Gm24632-201ENSMUST00000122770 323 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Gm25354-201ENSMUST00000179110 105 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.26□□□□□ -1.89
Trim47Q8C0E3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm25466-201ENSMUST00000103995 132 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm24890-201ENSMUST00000104389 102 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm23468-201ENSMUST00000157125 108 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm23325-201ENSMUST00000157422 129 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm25370-201ENSMUST00000158159 94 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm27532-201ENSMUST00000183726 113 ntBASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim47Q8C0E3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Gm22750-201ENSMUST00000102076 103 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Mir34a-201ENSMUST00000083559 102 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trim47Q8C0E3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm23715-201ENSMUST00000157354 106 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm24958-201ENSMUST00000158009 97 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm24637-201ENSMUST00000158674 85 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm24801-201ENSMUST00000178503 105 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm25627-201ENSMUST00000084003 153 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.23□□□□□ -1.89
Trim47Q8C0E3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Mir693-201ENSMUST00000102187 89 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm13862-201ENSMUST00000121220 197 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm23351-201ENSMUST00000158427 125 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Mir3965-201ENSMUST00000175570 69 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm37007-201ENSMUST00000194234 319 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm45288-201ENSMUST00000210236 151 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm25124-201ENSMUST00000083345 164 ntBASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim47Q8C0E3 Gm24238-201ENSMUST00000157792 98 ntBASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm22853-201ENSMUST00000174974 131 ntBASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm20108-201ENSMUST00000219977 153 ntBASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm25337-201ENSMUST00000083723 104 ntBASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.21□□□□□ -1.9
Trim47Q8C0E3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm22674-201ENSMUST00000104413 131 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Mir293-201ENSMUST00000104841 80 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm24691-201ENSMUST00000157762 140 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm23917-201ENSMUST00000175256 98 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 333.4 ms