Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm44489-201ENSMUST00000104619 97 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm23409-201ENSMUST00000158516 237 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm24837-201ENSMUST00000158683 81 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm22858-201ENSMUST00000174972 76 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Mir6350-201ENSMUST00000183639 105 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm27330-201ENSMUST00000184689 132 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a1Q04857 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a1Q04857 Mir155-201ENSMUST00000083463 65 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Mir489-201ENSMUST00000093599 107 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a1Q04857 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.92□□□□□ -1.94
Col6a1Q04857 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm13588-201ENSMUST00000120026 135 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm22510-201ENSMUST00000179304 79 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm26336-201ENSMUST00000179449 79 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm26390-201ENSMUST00000179628 79 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm19118-201ENSMUST00000222554 98 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm25588-201ENSMUST00000082501 140 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm26168-201ENSMUST00000083787 112 ntBASIC2.91□□□□□ -1.94
Col6a1Q04857 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col6a1Q04857 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a1Q04857 Gm24375-201ENSMUST00000104397 132 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm26015-201ENSMUST00000104402 125 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm15536-201ENSMUST00000121411 114 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm23859-201ENSMUST00000158383 64 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm25124-201ENSMUST00000083345 164 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm23249-201ENSMUST00000083369 161 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm23244-201ENSMUST00000083375 92 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm23038-201ENSMUST00000083873 104 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.9□□□□□ -1.95
Col6a1Q04857 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col6a1Q04857 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm24670-201ENSMUST00000104154 132 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm14946-201ENSMUST00000119859 296 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm13433-201ENSMUST00000121701 240 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm25544-201ENSMUST00000122676 120 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm24082-201ENSMUST00000175175 83 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Gm27369-201ENSMUST00000185182 71 ntBASIC2.89□□□□□ -1.95
Col6a1Q04857 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a1Q04857 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col6a1Q04857 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm22151-201ENSMUST00000116963 58 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm12013-201ENSMUST00000121971 155 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm22551-201ENSMUST00000157795 103 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Snord53-201ENSMUST00000175146 78 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm37330-201ENSMUST00000192606 153 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm37807-201ENSMUST00000194310 190 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Gm26458-201ENSMUST00000082832 128 ntBASIC2.88□□□□□ -1.95
Col6a1Q04857 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a1Q04857 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm16355-201ENSMUST00000128606 231 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm26105-201ENSMUST00000157253 190 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm23253-201ENSMUST00000157441 104 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm25910-201ENSMUST00000157620 140 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm22330-201ENSMUST00000158068 115 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm22264-201ENSMUST00000178200 107 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.87□□□□□ -1.95
Col6a1Q04857 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm22306-201ENSMUST00000082692 107 ntBASIC2.87□□□□□ -1.95
Col6a1Q04857 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.87□□□□□ -1.95
Col6a1Q04857 Gm24559-201ENSMUST00000157519 121 ntBASIC2.86□□□□□ -1.95
Col6a1Q04857 Mir6406-201ENSMUST00000183592 120 ntBASIC2.86□□□□□ -1.95
Col6a1Q04857 Gm27527-201ENSMUST00000183903 99 ntBASIC2.86□□□□□ -1.95
Col6a1Q04857 Gm27399-201ENSMUST00000184250 78 ntBASIC2.86□□□□□ -1.95
Col6a1Q04857 Gm44477-201ENSMUST00000199661 110 ntBASIC2.86□□□□□ -1.95
Col6a1Q04857 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a1Q04857 Gm23113-201ENSMUST00000158477 99 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 Mir8103-201ENSMUST00000183945 107 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 Mir8116-201ENSMUST00000184134 97 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 Gm19257-201ENSMUST00000186121 183 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.85□□□□□ -1.95
Col6a1Q04857 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col6a1Q04857 Gm25091-201ENSMUST00000103997 71 ntBASIC2.84□□□□□ -1.95
Col6a1Q04857 Gm26473-201ENSMUST00000116763 127 ntBASIC2.84□□□□□ -1.95
Col6a1Q04857 Gm14709-201ENSMUST00000121225 304 ntBASIC2.84□□□□□ -1.95
Col6a1Q04857 Gm22950-201ENSMUST00000082776 107 ntBASIC2.84□□□□□ -1.95
Col6a1Q04857 Gm26074-201ENSMUST00000104063 129 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 Gm24280-201ENSMUST00000104237 134 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a1Q04857 Gm44491-201ENSMUST00000196794 96 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 Mir6925-201ENSMUST00000197857 70 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.83□□□□□ -1.96
Col6a1Q04857 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a1Q04857 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a1Q04857 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms