Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.55□□□□□ -2
Msx2Q03358 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.55□□□□□ -2
Msx2Q03358 Gm23911-201ENSMUST00000104596 134 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm24627-201ENSMUST00000122764 138 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm22322-201ENSMUST00000157151 111 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm24913-201ENSMUST00000157286 107 ntBASIC2.55□□□□□ -2
Msx2Q03358 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.55□□□□□ -2
Msx2Q03358 Mir3094-201ENSMUST00000175121 64 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm42807-201ENSMUST00000200141 329 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.55□□□□□ -2
Msx2Q03358 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.55□□□□□ -2
Msx2Q03358 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.55□□□□□ -2
Msx2Q03358 Gm24536-201ENSMUST00000083144 107 ntBASIC2.55□□□□□ -2
Msx2Q03358 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.54□□□□□ -2
Msx2Q03358 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Msx2Q03358 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.54□□□□□ -2
Msx2Q03358 Gm22729-201ENSMUST00000158088 129 ntBASIC2.54□□□□□ -2
Msx2Q03358 Gm26406-201ENSMUST00000158503 124 ntBASIC2.54□□□□□ -2
Msx2Q03358 Mir1931-201ENSMUST00000158589 119 ntBASIC2.54□□□□□ -2
Msx2Q03358 Gm25711-201ENSMUST00000158633 128 ntBASIC2.54□□□□□ -2
Msx2Q03358 Gm25490-201ENSMUST00000158734 130 ntBASIC2.54□□□□□ -2
Msx2Q03358 Mir7k-201ENSMUST00000184115 110 ntBASIC2.54□□□□□ -2
Msx2Q03358 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.54□□□□□ -2
Msx2Q03358 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.54□□□□□ -2
Msx2Q03358 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.54□□□□□ -2
Msx2Q03358 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Msx2Q03358 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Msx2Q03358 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm26076-201ENSMUST00000104065 105 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm25878-201ENSMUST00000104327 93 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm25500-201ENSMUST00000104426 123 ntBASIC2.53□□□□□ -2
Msx2Q03358 DQ267100-201ENSMUST00000122600 72 ntBASIC2.53□□□□□ -2
Msx2Q03358 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.53□□□□□ -2
Msx2Q03358 Gm22279-201ENSMUST00000157200 93 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm26411-201ENSMUST00000157668 107 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm25558-201ENSMUST00000158083 106 ntBASIC2.53□□□□□ -2
Msx2Q03358 Rnu7-201ENSMUST00000158458 62 ntBASIC2.53□□□□□ -2
Msx2Q03358 Mir7081-201ENSMUST00000184490 75 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm28282-201ENSMUST00000186072 186 ntBASIC2.53□□□□□ -2
Msx2Q03358 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.53□□□□□ -2
Msx2Q03358 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.53□□□□□ -2
Msx2Q03358 Gm19118-201ENSMUST00000222554 98 ntBASIC2.53□□□□□ -2
Msx2Q03358 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Msx2Q03358 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
Msx2Q03358 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.53□□□□□ -2.01
Msx2Q03358 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Msx2Q03358 Gm25407-201ENSMUST00000104102 134 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm22071-201ENSMUST00000116857 83 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm22638-201ENSMUST00000179674 107 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm27991-201ENSMUST00000184804 137 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm43626-201ENSMUST00000198575 162 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm24099-201ENSMUST00000083384 107 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Gm25627-201ENSMUST00000084003 153 ntBASIC2.52□□□□□ -2.01
Msx2Q03358 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Msx2Q03358 Snord78-201ENSMUST00000104032 66 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm22772-201ENSMUST00000104451 121 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm23983-201ENSMUST00000157142 114 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm23600-201ENSMUST00000157260 71 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm22535-201ENSMUST00000158174 119 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm22983-201ENSMUST00000158308 104 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm24879-201ENSMUST00000158386 143 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm27446-201ENSMUST00000183963 89 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Mir6917-201ENSMUST00000184111 61 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Mir6928-201ENSMUST00000185166 70 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm45386-201ENSMUST00000210194 218 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm18346-201ENSMUST00000216782 325 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Gm22454-201ENSMUST00000082583 107 ntBASIC2.51□□□□□ -2.01
Msx2Q03358 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Msx2Q03358 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Msx2Q03358 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Msx2Q03358 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Msx2Q03358 Gm14937-201ENSMUST00000119709 208 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Gm23980-201ENSMUST00000157135 158 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Gm23090-201ENSMUST00000177331 78 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Gm28358-202ENSMUST00000189292 223 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.5□□□□□ -2.01
Msx2Q03358 Mir7215-201ENSMUST00000200383 51 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Mir29c-201ENSMUST00000083614 88 ntBASIC2.5□□□□□ -2.01
Msx2Q03358 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Msx2Q03358 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Msx2Q03358 Gm14674-201ENSMUST00000117816 342 ntBASIC2.49□□□□□ -2.01
Msx2Q03358 Gm14671-201ENSMUST00000121790 262 ntBASIC2.49□□□□□ -2.01
Msx2Q03358 Mir7242-201ENSMUST00000183710 79 ntBASIC2.49□□□□□ -2.01
Msx2Q03358 Snord118-201ENSMUST00000082965 135 ntBASIC2.49□□□□□ -2.01
Msx2Q03358 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Msx2Q03358 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.49□□□□□ -2.01
Msx2Q03358 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.48□□□□□ -2.01
Msx2Q03358 Gm22939-201ENSMUST00000103958 131 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Gm25280-201ENSMUST00000157269 101 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Gm24787-201ENSMUST00000157380 123 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Mir6353-201ENSMUST00000183596 113 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Gm9156-201ENSMUST00000189660 463 ntBASIC2.48□□□□□ -2.01
Msx2Q03358 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Msx2Q03358 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Msx2Q03358 Gm25308-201ENSMUST00000104171 158 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms