Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col13a1Q9R1N9 Gm42960-201ENSMUST00000202160 241 ntBASIC2.21□□□□□ -2.06
Col13a1Q9R1N9 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.21□□□□□ -2.06
Col13a1Q9R1N9 Gm24482-201ENSMUST00000117005 93 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm14567-201ENSMUST00000117155 174 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm24837-201ENSMUST00000158683 81 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm23548-201ENSMUST00000158963 106 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm27672-201ENSMUST00000183751 204 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Mir3961-201ENSMUST00000198795 59 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Snord61-201ENSMUST00000083176 71 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm22681-201ENSMUST00000083853 106 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.2□□□□□ -2.06
Col13a1Q9R1N9 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm2830-201ENSMUST00000140330 385 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm22279-201ENSMUST00000157200 93 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm23409-201ENSMUST00000158516 237 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm44481-201ENSMUST00000197288 84 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm44339-201ENSMUST00000200598 84 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm44976-201ENSMUST00000205543 261 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm44903-201ENSMUST00000206840 130 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Mir201-201ENSMUST00000083470 66 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col13a1Q9R1N9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm23060-201ENSMUST00000102345 109 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Mir7039-201ENSMUST00000183852 85 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Mir7026-201ENSMUST00000184384 67 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm18665-201ENSMUST00000189783 270 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm42719-201ENSMUST00000197393 355 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm8219-201ENSMUST00000218309 242 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm6109-201ENSMUST00000223297 348 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Gm24148-201ENSMUST00000082762 80 ntBASIC2.18□□□□□ -2.06
Col13a1Q9R1N9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm15069-201ENSMUST00000117792 192 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm15068-201ENSMUST00000119796 192 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm13246-201ENSMUST00000120994 315 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm26157-201ENSMUST00000158974 126 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Snord53-201ENSMUST00000175146 78 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm22306-201ENSMUST00000082692 107 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Mir301-201ENSMUST00000083655 86 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Col13a1Q9R1N9 Gm24049-201ENSMUST00000102409 100 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm23854-201ENSMUST00000158378 108 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm24177-201ENSMUST00000158927 131 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm25996-201ENSMUST00000175393 117 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm43381-201ENSMUST00000198553 165 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm25797-201ENSMUST00000082640 107 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm23445-201ENSMUST00000082800 107 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.16□□□□□ -2.06
Col13a1Q9R1N9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.15□□□□□ -2.06
Col13a1Q9R1N9 Gm26011-201ENSMUST00000104410 104 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Gm25060-201ENSMUST00000157374 130 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Gm23390-201ENSMUST00000157393 106 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Gm24010-201ENSMUST00000157731 282 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Gm23264-201ENSMUST00000083372 107 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col13a1Q9R1N9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm22752-201ENSMUST00000102083 109 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm11644-201ENSMUST00000119735 150 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm25884-201ENSMUST00000157782 62 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm24747-201ENSMUST00000157835 87 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm44358-201ENSMUST00000196301 98 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm44464-201ENSMUST00000198010 138 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm23303-201ENSMUST00000082714 152 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Gm25627-201ENSMUST00000084003 153 ntBASIC2.14□□□□□ -2.07
Col13a1Q9R1N9 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms