Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RN7SKP69-201ENST00000365390 305 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL360013.1-201ENST00000419031 858 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 OSTCP4-201ENST00000424397 449 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 OR6R1P-201ENST00000431838 940 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 IGLV3-4-201ENST00000432300 244 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL731534.1-201ENST00000434711 269 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 KRT8P51-201ENST00000438938 274 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 CXCR2P1-202ENST00000443392 1074 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 RN7SL326P-201ENST00000477493 296 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC138832.1-201ENST00000522871 556 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC124891.1-201ENST00000536322 519 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 HMGN1P26-201ENST00000558737 303 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 LINC00556-201ENST00000569603 412 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC025283.1-201ENST00000572039 734 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 RN7SL66P-201ENST00000582099 264 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 MIR212-201ENST00000586026 110 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC020916.2-201ENST00000591242 360 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 MIR132-201ENST00000591554 101 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 U91328.4-201ENST00000608919 517 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 MIR6811-201ENST00000620409 58 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 GVINP1-202ENST00000531871 7271 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RPL11P4-201ENST00000332269 436 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RNA5SP85-201ENST00000365378 119 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ARSFP1-201ENST00000398758 477 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RPL21P50-201ENST00000417698 477 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 HMGN2P27-201ENST00000427352 270 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC112492.2-201ENST00000432774 1030 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 SOCS5P1-201ENST00000440415 949 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RPL5P25-201ENST00000441148 775 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AL445991.1-201ENST00000450381 475 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RN7SL352P-201ENST00000466002 277 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RPS4XP17-201ENST00000479057 754 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ST13P12-201ENST00000508958 1094 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 Y_RNA.710-201ENST00000516975 110 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC008055.1-201ENST00000547032 609 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC093591.2-201ENST00000565254 3843 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC139792.1-201ENST00000607051 647 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 MAPK10-350ENST00000641777 965 ntBASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms