Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.86□□□□□ -1.95
Trim39Q9ESN2 Gm25627-201ENSMUST00000084003 153 ntBASIC2.86□□□□□ -1.95
Trim39Q9ESN2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.86□□□□□ -1.95
Trim39Q9ESN2 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim39Q9ESN2 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim39Q9ESN2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm26076-201ENSMUST00000104065 105 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm22590-201ENSMUST00000104247 128 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm24468-201ENSMUST00000104489 104 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm14564-201ENSMUST00000122159 294 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm24905-201ENSMUST00000158129 104 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm6788-201ENSMUST00000166459 270 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm22858-201ENSMUST00000174972 76 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Mir3094-201ENSMUST00000175121 64 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm27374-201ENSMUST00000183660 81 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Snord118-201ENSMUST00000082965 135 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm24536-201ENSMUST00000083144 107 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Mir34a-201ENSMUST00000083559 102 ntBASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim39Q9ESN2 Gm22279-201ENSMUST00000157200 93 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm25884-201ENSMUST00000157782 62 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm24314-201ENSMUST00000158274 123 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm25769-201ENSMUST00000158569 127 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm25711-201ENSMUST00000158633 128 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm25978-201ENSMUST00000158698 90 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm27893-201ENSMUST00000184408 194 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Mir8096-201ENSMUST00000184526 127 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm28282-201ENSMUST00000186072 186 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm28270-201ENSMUST00000188550 109 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm28328-201ENSMUST00000188869 109 ntBASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trim39Q9ESN2 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.84□□□□□ -1.96
Trim39Q9ESN2 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trim39Q9ESN2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trim39Q9ESN2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trim39Q9ESN2 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm26477-201ENSMUST00000122617 323 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm22731-201ENSMUST00000158086 94 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm22387-201ENSMUST00000158191 131 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm24572-201ENSMUST00000175505 88 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm36776-201ENSMUST00000207006 203 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim39Q9ESN2 Gm24118-201ENSMUST00000103972 126 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm26051-201ENSMUST00000104642 93 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm23652-201ENSMUST00000116752 107 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm22033-201ENSMUST00000116947 90 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm24913-201ENSMUST00000157286 107 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm44308-201ENSMUST00000197080 99 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Gm23297-201ENSMUST00000083184 127 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim39Q9ESN2 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm14937-201ENSMUST00000119709 208 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm23791-201ENSMUST00000122553 293 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm16265-201ENSMUST00000134558 108 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm26061-201ENSMUST00000175584 108 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm27446-201ENSMUST00000183963 89 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm29602-201ENSMUST00000186887 442 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm43206-201ENSMUST00000197990 114 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Mir29c-201ENSMUST00000083614 88 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Mir323-201ENSMUST00000083683 86 ntBASIC2.81□□□□□ -1.96
Trim39Q9ESN2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm15190-201ENSMUST00000120855 276 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm26253-201ENSMUST00000122493 103 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm22638-201ENSMUST00000179674 107 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm27991-201ENSMUST00000184804 137 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm37085-201ENSMUST00000193780 196 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim39Q9ESN2 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Snora33-201ENSMUST00000093556 129 ntBASIC2.8□□□□□ -1.96
Trim39Q9ESN2 Gm22956-201ENSMUST00000122520 80 ntBASIC2.79□□□□□ -1.96
Trim39Q9ESN2 Gm22416-201ENSMUST00000158590 88 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 221 ms