Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mir499-201ENSMUST00000102357 79 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Gm24837-201ENSMUST00000158683 81 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Mir6386-201ENSMUST00000183558 104 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Mir3961-201ENSMUST00000198795 59 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Gm23445-201ENSMUST00000082800 107 ntBASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Nkx6-1Q99MA9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm16186-201ENSMUST00000120132 216 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm24443-201ENSMUST00000157242 132 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm26084-201ENSMUST00000157903 104 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm23567-201ENSMUST00000178005 107 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm42960-201ENSMUST00000202160 241 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Gm23303-201ENSMUST00000082714 152 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Mir127-201ENSMUST00000093568 70 ntBASIC2.59□□□□□ -1.99
Nkx6-1Q99MA9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Nkx6-1Q99MA9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm23599-201ENSMUST00000157261 251 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm25060-201ENSMUST00000157374 130 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm25866-201ENSMUST00000158245 112 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm26157-201ENSMUST00000158974 126 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm24926-201ENSMUST00000178053 79 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm22632-201ENSMUST00000178266 79 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Gm8508-201ENSMUST00000061226 363 ntBASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Nkx6-1Q99MA9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm24171-201ENSMUST00000104126 131 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm2830-201ENSMUST00000140330 385 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm26277-201ENSMUST00000157097 152 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm22279-201ENSMUST00000157200 93 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm22338-201ENSMUST00000157715 129 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm22163-201ENSMUST00000158408 135 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.57□□□□□ -2
Nkx6-1Q99MA9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Gm23390-201ENSMUST00000157393 106 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Gm24559-201ENSMUST00000157519 121 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Gm23504-201ENSMUST00000158988 95 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Mir8103-201ENSMUST00000183945 107 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Nkx6-1Q99MA9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25089-201ENSMUST00000102015 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm16171-201ENSMUST00000118004 324 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25840-201ENSMUST00000177821 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24952-201ENSMUST00000177909 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23682-201ENSMUST00000178146 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24652-201ENSMUST00000178223 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm22629-201ENSMUST00000178272 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24021-201ENSMUST00000178435 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm22274-201ENSMUST00000178441 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm22050-201ENSMUST00000178442 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23688-201ENSMUST00000178502 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23944-201ENSMUST00000178607 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm26283-201ENSMUST00000178625 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25452-201ENSMUST00000178776 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23286-201ENSMUST00000178963 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm22640-201ENSMUST00000179035 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25984-201ENSMUST00000179129 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25585-201ENSMUST00000179469 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm26374-201ENSMUST00000179737 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24040-201ENSMUST00000179786 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25017-201ENSMUST00000179805 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm23618-201ENSMUST00000179912 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm26284-201ENSMUST00000180107 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24570-201ENSMUST00000180314 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm24654-201ENSMUST00000180315 79 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm27700-201ENSMUST00000185003 81 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Mir7657-201ENSMUST00000196051 57 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm25588-201ENSMUST00000082501 140 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Mir301-201ENSMUST00000083655 86 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.55□□□□□ -2
Nkx6-1Q99MA9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm26074-201ENSMUST00000104063 129 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm14502-201ENSMUST00000118154 113 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm15272-201ENSMUST00000120865 233 ntBASIC2.54□□□□□ -2
Nkx6-1Q99MA9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms