Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 ETF1P1-206ENST00000427296 984 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AL606490.8-201ENST00000441624 319 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AL157884.3-201ENST00000448273 1184 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC236972.4-201ENST00000458091 963 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 RN7SL552P-201ENST00000462094 276 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 LARP7P4-201ENST00000481075 878 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 RPL5P33-201ENST00000487833 905 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC008945.1-201ENST00000505144 499 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC096661.1-201ENST00000515870 822 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 OR7E10P-201ENST00000526420 991 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC089984.3-201ENST00000552838 363 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AL162632.2-201ENST00000553933 399 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC090241.1-201ENST00000587732 621 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC245128.3-201ENST00000594721 748 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 HMGB1P51-201ENST00000605166 638 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 MIR8082-201ENST00000612488 81 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN1BQ07699 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN1BQ07699 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SCN1BQ07699 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC126474.2-201ENST00000623268 1750 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 AC095038.1-201ENST00000429248 1591 ntBASIC5.54□□□□□ -1.52
SCN1BQ07699 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCN1BQ07699 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC074141.1-201ENST00000588129 2995 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 ADAM24P-201ENST00000398655 2101 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 RNA5SP321-201ENST00000362722 111 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 RNA5SP302-201ENST00000364896 100 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC083799.1-201ENST00000366451 910 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 ST13P16-201ENST00000401760 781 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 RPL10P10-201ENST00000403509 664 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL929472.1-201ENST00000417484 429 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 MTCYBP7-201ENST00000419540 1134 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL138479.1-201ENST00000426913 484 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 NDUFA5P1-201ENST00000433858 341 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 ARL5AP3-201ENST00000439327 386 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL158214.1-201ENST00000444423 404 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 RPS27AP3-201ENST00000453803 454 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN1BQ07699 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC099340.1-201ENST00000475247 599 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR52H2P-201ENST00000514607 902 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC093878.1-201ENST00000515630 432 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 IGKV1D-22-201ENST00000518953 324 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms