Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 AL352984.2-202ENST00000613699 155 ntBASIC6.32□□□□□ -1.4
HADHAP40939 MIR7109-201ENST00000613748 65 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AL590410.1-201ENST00000617925 333 ntBASIC6.32□□□□□ -1.4
HADHAP40939 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AL731532.1-201ENST00000623972 4236 ntBASIC6.32□□□□□ -1.4
HADHAP40939 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AL359976.1-201ENST00000418655 3528 ntBASIC6.32□□□□□ -1.4
HADHAP40939 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 Z83820.1-201ENST00000456978 1499 ntBASIC6.31□□□□□ -1.4
HADHAP40939 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HADHAP40939 MIR621-201ENST00000384919 96 ntBASIC6.31□□□□□ -1.4
HADHAP40939 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HADHAP40939 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 DHFRP2-201ENST00000414224 547 ntBASIC6.31□□□□□ -1.4
HADHAP40939 RPS26P38-201ENST00000414476 348 ntBASIC6.31□□□□□ -1.4
HADHAP40939 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.31□□□□□ -1.4
HADHAP40939 VN1R31P-201ENST00000417498 730 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 AC016027.5-201ENST00000427227 210 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 MORF4-201ENST00000447135 971 ntBASIC6.31□□□□□ -1.4
HADHAP40939 COX4I1P2-201ENST00000447446 547 ntBASIC6.31□□□□□ -1.4
HADHAP40939 RPS27AP3-201ENST00000453803 454 ntBASIC6.31□□□□□ -1.4
HADHAP40939 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 RN7SL326P-201ENST00000477493 296 ntBASIC6.31□□□□□ -1.4
HADHAP40939 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 AC008429.4-201ENST00000521201 182 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 RPA2P3-201ENST00000533268 770 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.31□□□□□ -1.4
HADHAP40939 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HADHAP40939 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 AC006924.1-201ENST00000610750 559 ntBASIC6.31□□□□□ -1.4
HADHAP40939 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AF117829.2-201ENST00000619538 361 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AC089999.3-201ENST00000622440 577 ntBASIC6.31□□□□□ -1.4
HADHAP40939 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.31□□□□□ -1.4
HADHAP40939 OR7E91P-202ENST00000642062 1198 ntBASIC6.31□□□□□ -1.4
HADHAP40939 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HADHAP40939 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HADHAP40939 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.31□□□□□ -1.4
HADHAP40939 PPBPP2-201ENST00000513150 1362 ntBASIC6.31□□□□□ -1.4
HADHAP40939 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.3□□□□□ -1.4
HADHAP40939 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HADHAP40939 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HADHAP40939 YWHAZP4-201ENST00000392459 708 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AC003045.1-201ENST00000398779 713 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.3□□□□□ -1.4
HADHAP40939 PRUNEP1-201ENST00000425846 705 ntBASIC6.3□□□□□ -1.4
HADHAP40939 LINC00328-2P-201ENST00000436585 219 ntBASIC6.3□□□□□ -1.4
HADHAP40939 RAB9AP5-201ENST00000437794 597 ntBASIC6.3□□□□□ -1.4
HADHAP40939 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 GTF2IP14-201ENST00000441415 586 ntBASIC6.3□□□□□ -1.4
HADHAP40939 RAB9AP2-201ENST00000443911 597 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms