Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 RNA5SP273-201ENST00000362484 113 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 RNA5SP477-201ENST00000362639 119 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC073410.1-201ENST00000435125 589 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC025458.1-201ENST00000506046 166 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MIR2117-201ENST00000516780 80 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC007346.2-201ENST00000564816 892 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC090826.1-203ENST00000569235 490 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC134669.1-201ENST00000581275 672 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MIR4271-201ENST00000582451 67 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MIR6793-201ENST00000612376 63 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MIR6071-201ENST00000616741 78 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AL445670.1-201ENST00000618889 801 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AC024884.1-201ENST00000620583 399 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ZNF969P-201ENST00000510345 2341 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 TMSB4XP2-201ENST00000335179 210 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RN7SKP128-201ENST00000364270 303 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RNA5SP433-201ENST00000364491 114 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC004386.1-201ENST00000393214 761 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 VN1R12P-201ENST00000403778 876 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC016739.1-201ENST00000405359 345 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RPL23AP18-201ENST00000416139 468 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RPL24P2-201ENST00000421023 475 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 BX284632.2-201ENST00000421091 399 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AL512605.1-202ENST00000441919 381 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AL359955.2-201ENST00000445380 353 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 OSTCP1-201ENST00000455507 450 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC093166.4-201ENST00000457867 318 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 OR5H7P-201ENST00000514084 930 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SETP21-201ENST00000514799 892 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 Y_RNA.667-201ENST00000516212 107 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 RNA5SP438-201ENST00000516561 112 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AL499605.1-201ENST00000604628 403 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 AC025262.3-201ENST00000623666 360 ntBASIC5.98□□□□□ -1.45
HLA-DQB2P05538 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DQB2P05538 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 298.1 ms