Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 SNORD35A-201ENST00000363389 86 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 RANP6-201ENST00000413691 644 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PUDPP2-201ENST00000431423 643 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 CYCSP51-201ENST00000443545 318 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 GAPDHP23-201ENST00000444823 993 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 RPS10P28-201ENST00000480396 498 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 RPL21P42-201ENST00000488408 464 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC105391.1-201ENST00000503155 1045 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 GAPDHP62-201ENST00000515313 990 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 TMEM97P2-201ENST00000517841 403 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC005332.4-201ENST00000592752 579 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AL121782.1-201ENST00000611242 413 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 MIR8082-201ENST00000612488 81 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 MRPL57P3-201ENST00000619218 176 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC027506.1-201ENST00000621395 198 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AC007347.2-201ENST00000623044 180 ntBASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 MRPS6P2-201ENST00000381143 370 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 MIR431-201ENST00000385266 114 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 RN7SKP137-201ENST00000411074 307 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL133482.1-201ENST00000415988 498 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 HYALP1-201ENST00000417674 1279 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC009784.1-201ENST00000426484 460 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 ETF1P1-206ENST00000427296 984 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 RPL12P18-201ENST00000437175 325 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL359265.1-201ENST00000440296 795 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR52I1-201ENST00000450052 1050 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 RBMY2BP-202ENST00000451071 1156 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 RN7SL836P-201ENST00000476140 296 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 COX6B1P2-201ENST00000489624 230 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC023424.1-201ENST00000496058 459 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AP004607.5-201ENST00000532034 217 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 NPIPB14P-203ENST00000532298 987 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 SLC25A51P2-201ENST00000535708 889 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL121594.2-201ENST00000541658 472 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AC069240.2-201ENST00000550242 609 ntBASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.69□□□□□ -1.66
RBFOX3A6NFN3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms