Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 OR56A4-201ENST00000330728 1209 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RN7SKP130-201ENST00000364924 301 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LDHAP5-201ENST00000394996 622 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 HMGB1P13-201ENST00000406019 642 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RN7SKP97-201ENST00000410966 333 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL672212.1-201ENST00000422246 400 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC006065.1-201ENST00000422539 802 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL034379.1-201ENST00000423216 253 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC010099.3-201ENST00000423896 409 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 MTND2P22-201ENST00000444325 1033 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RN7SL372P-201ENST00000461982 298 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC083806.1-201ENST00000468934 316 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RN7SL267P-201ENST00000485107 261 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC134050.1-201ENST00000495088 933 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RPL5P11-201ENST00000498068 893 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC113420.1-201ENST00000507903 571 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC009097.3-201ENST00000563557 1018 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 MIR744-201ENST00000578242 98 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AP002906.1-201ENST00000603405 233 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC079610.2-201ENST00000604818 690 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC019131.2-201ENST00000609071 870 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AL137000.1-201ENST00000610528 1244 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC084782.3-201ENST00000612282 578 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 RPL23AP61-201ENST00000623642 466 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 WBP11P1-201ENST00000562560 1931 ntBASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM39Q9HCM9 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AC095038.1-201ENST00000429248 1591 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 RPL12P13-201ENST00000310055 497 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 RNU6-236P-201ENST00000363886 106 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 LRRC37BP1-201ENST00000398851 714 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 CHMP1B2P-201ENST00000399581 597 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AC119751.3-201ENST00000399720 670 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL079341.1-201ENST00000404701 1207 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 SLC20A1P1-201ENST00000413906 956 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 RPS24P7-201ENST00000416921 246 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL449283.1-202ENST00000418249 604 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 MTCO3P4-201ENST00000419236 787 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL365338.1-201ENST00000422282 858 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AC093084.1-201ENST00000424233 687 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 HIGD1AP4-201ENST00000430194 280 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 MEF2AP1-201ENST00000454867 863 ntBASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM39Q9HCM9 RN7SL654P-201ENST00000479178 292 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 422.8 ms