Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
APOEP02649 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.4□□□□□ -1.39
APOEP02649 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
APOEP02649 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
APOEP02649 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.4□□□□□ -1.39
APOEP02649 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.4□□□□□ -1.39
APOEP02649 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.4□□□□□ -1.39
APOEP02649 GTF2IP4-201ENST00000453092 2054 ntBASIC6.4□□□□□ -1.39
APOEP02649 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
APOEP02649 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
APOEP02649 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
APOEP02649 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 AC140479.2-201ENST00000421567 3130 ntBASIC6.39□□□□□ -1.39
APOEP02649 AC009831.5-201ENST00000624000 3189 ntBASIC6.39□□□□□ -1.39
APOEP02649 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 AC092724.1-201ENST00000624623 3397 ntBASIC6.39□□□□□ -1.39
APOEP02649 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 RNU1-134P-201ENST00000362935 165 ntBASIC6.39□□□□□ -1.39
APOEP02649 MIR621-201ENST00000384919 96 ntBASIC6.39□□□□□ -1.39
APOEP02649 CXADRP1-201ENST00000398098 1095 ntBASIC6.39□□□□□ -1.39
APOEP02649 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC007679.3-201ENST00000434035 414 ntBASIC6.39□□□□□ -1.39
APOEP02649 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.39□□□□□ -1.39
APOEP02649 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 SNRPCP3-201ENST00000474888 476 ntBASIC6.39□□□□□ -1.39
APOEP02649 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.39□□□□□ -1.39
APOEP02649 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.39□□□□□ -1.39
APOEP02649 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 AC090651.1-201ENST00000567865 634 ntBASIC6.39□□□□□ -1.39
APOEP02649 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.39□□□□□ -1.39
APOEP02649 AC091167.5-201ENST00000605689 894 ntBASIC6.39□□□□□ -1.39
APOEP02649 CXADRP3-202ENST00000617265 1100 ntBASIC6.39□□□□□ -1.39
APOEP02649 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
APOEP02649 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
APOEP02649 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
APOEP02649 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
APOEP02649 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
APOEP02649 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 AC096921.2-201ENST00000561507 1916 ntBASIC6.38□□□□□ -1.39
APOEP02649 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
APOEP02649 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
APOEP02649 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.38□□□□□ -1.39
APOEP02649 RPL35AP31-201ENST00000418340 337 ntBASIC6.38□□□□□ -1.39
APOEP02649 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 SEPT14P12-201ENST00000442280 560 ntBASIC6.38□□□□□ -1.39
APOEP02649 OR52E7P-201ENST00000452394 933 ntBASIC6.38□□□□□ -1.39
APOEP02649 AP002884.1-201ENST00000479691 655 ntBASIC6.38□□□□□ -1.39
APOEP02649 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 CR383658.1-201ENST00000514609 734 ntBASIC6.38□□□□□ -1.39
APOEP02649 RN7SKP67-201ENST00000515905 235 ntBASIC6.38□□□□□ -1.39
APOEP02649 RNA5SP434-201ENST00000516647 121 ntBASIC6.38□□□□□ -1.39
APOEP02649 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.38□□□□□ -1.39
APOEP02649 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.38□□□□□ -1.39
APOEP02649 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.38□□□□□ -1.39
APOEP02649 AC092332.1-201ENST00000563684 829 ntBASIC6.38□□□□□ -1.39
APOEP02649 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.38□□□□□ -1.39
APOEP02649 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.38□□□□□ -1.39
APOEP02649 CAP1P2-201ENST00000417455 1409 ntBASIC6.38□□□□□ -1.39
APOEP02649 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
APOEP02649 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms