Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm11388-201ENSMUST00000120908 159 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm25269-201ENSMUST00000122601 104 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm25054-201ENSMUST00000157370 97 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23542-201ENSMUST00000158208 96 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm25718-201ENSMUST00000158632 118 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm21885-201ENSMUST00000178891 327 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm27545-201ENSMUST00000184755 202 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm42739-201ENSMUST00000200687 226 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm44459-201ENSMUST00000203926 160 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm6109-201ENSMUST00000223297 348 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23731-201ENSMUST00000083749 107 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23040-201ENSMUST00000083869 163 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.08□□□□□ -2.24
Col5a1O88207 Gm22270-201ENSMUST00000104034 132 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm12686-201ENSMUST00000120546 397 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm23324-201ENSMUST00000157421 131 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm24222-201ENSMUST00000158834 93 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Col5a1O88207 Gm33866-201ENSMUST00000196911 289 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.07□□□□□ -2.24
Col5a1O88207 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Col5a1O88207 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Gm26175-201ENSMUST00000083794 131 ntBASIC1.07□□□□□ -2.24
Col5a1O88207 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Col5a1O88207 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm24126-201ENSMUST00000104111 106 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm23013-201ENSMUST00000104146 106 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm14774-201ENSMUST00000117857 536 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm12646-201ENSMUST00000119144 238 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm24480-201ENSMUST00000157442 103 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm23588-201ENSMUST00000157659 99 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.06□□□□□ -2.24
Col5a1O88207 Gm23977-201ENSMUST00000177871 74 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.06□□□□□ -2.24
Col5a1O88207 Gm29005-201ENSMUST00000186773 320 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm18546-201ENSMUST00000197245 676 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Mir466e-201ENSMUST00000198862 84 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Gm43220-201ENSMUST00000199299 282 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.06□□□□□ -2.24
Col5a1O88207 Gm44977-201ENSMUST00000205283 420 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.06□□□□□ -2.24
Col5a1O88207 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.06□□□□□ -2.24
Col5a1O88207 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Col5a1O88207 Gm14782-201ENSMUST00000120151 195 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm25543-201ENSMUST00000122678 312 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.05□□□□□ -2.24
Col5a1O88207 Gm27723-201ENSMUST00000157398 63 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm23381-201ENSMUST00000157676 94 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Mir3535-201ENSMUST00000197651 147 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm26314-201ENSMUST00000083891 107 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Col5a1O88207 Gm23941-201ENSMUST00000101953 107 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm25495-201ENSMUST00000104431 131 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Mir873a-201ENSMUST00000104863 77 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 U6.1-201ENSMUST00000157443 101 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm27396-201ENSMUST00000157708 58 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Snora15-201ENSMUST00000177461 131 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm28849-201ENSMUST00000188127 174 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm28330-201ENSMUST00000190353 171 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm44482-201ENSMUST00000199232 103 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm2829-201ENSMUST00000213121 499 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm22980-201ENSMUST00000082608 70 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.05□□□□□ -2.24
Col5a1O88207 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Col5a1O88207 Gm26249-201ENSMUST00000116708 118 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm14846-201ENSMUST00000121868 216 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.04□□□□□ -2.24
Col5a1O88207 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22321-201ENSMUST00000157152 104 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22315-201ENSMUST00000158010 143 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22258-201ENSMUST00000177645 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm26032-201ENSMUST00000178535 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm25210-201ENSMUST00000178813 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm25157-201ENSMUST00000178914 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22046-201ENSMUST00000179027 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22951-201ENSMUST00000179471 107 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22941-201ENSMUST00000179630 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm25471-201ENSMUST00000180126 94 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Col5a1O88207 Mir7667-201ENSMUST00000183866 63 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm20257-202ENSMUST00000188643 130 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm24625-201ENSMUST00000082622 130 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm22571-201ENSMUST00000082984 70 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm24977-201ENSMUST00000083106 163 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Gm26265-201ENSMUST00000083277 135 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.04□□□□□ -2.24
Col5a1O88207 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Col5a1O88207 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms