Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC026782.2-201ENST00000510845 636 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC130366.1-201ENST00000526505 1192 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AP001804.2-201ENST00000533932 910 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC004232.2-201ENST00000574245 821 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AL353807.4-201ENST00000604995 257 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 MIR6736-201ENST00000616799 59 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS33AQ96AX1 AC025470.1-201ENST00000510053 2032 ntBASIC5.96□□□□□ -1.45
VPS33AQ96AX1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 MIR365B-201ENST00000362317 111 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 RNA5SP308-201ENST00000362532 115 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL353133.1-201ENST00000407695 401 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL672212.1-201ENST00000422246 400 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL354707.3-201ENST00000427308 331 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 VN1R53P-201ENST00000429536 957 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 Z85994.2-201ENST00000434327 452 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 RN7SL372P-201ENST00000461982 298 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC098583.1-201ENST00000480875 255 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 RN7SL714P-201ENST00000487050 298 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC008429.4-201ENST00000521201 182 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL133399.1-201ENST00000527476 298 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 MIR8082-201ENST00000612488 81 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 MIR7159-201ENST00000620587 66 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AC069234.4-201ENST00000621276 412 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 OR7E91P-202ENST00000642062 1198 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AL442128.2-201ENST00000620246 1824 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 UGT2B24P-201ENST00000514441 1597 ntBASIC5.96□□□□□ -1.46
VPS33AQ96AX1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS33AQ96AX1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS33AQ96AX1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms