Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm5002-201ENSMUST00000207145 223 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm19790-201ENSMUST00000214414 251 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Snord118-201ENSMUST00000082965 135 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm24536-201ENSMUST00000083144 107 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm25895-201ENSMUST00000083714 100 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Best3Q6H1V1 Mir293-201ENSMUST00000104841 80 ntBASIC3.09□□□□□ -1.91
Best3Q6H1V1 Gm23230-201ENSMUST00000157298 133 ntBASIC3.09□□□□□ -1.91
Best3Q6H1V1 Gm23642-201ENSMUST00000157858 258 ntBASIC3.09□□□□□ -1.91
Best3Q6H1V1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Best3Q6H1V1 Snord80-202ENSMUST00000199023 77 ntBASIC3.09□□□□□ -1.91
Best3Q6H1V1 Gm23264-201ENSMUST00000083372 107 ntBASIC3.09□□□□□ -1.91
Best3Q6H1V1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Best3Q6H1V1 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Best3Q6H1V1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Best3Q6H1V1 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Best3Q6H1V1 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm24595-201ENSMUST00000122501 110 ntBASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm27369-201ENSMUST00000185182 71 ntBASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm28344-201ENSMUST00000185704 279 ntBASIC3.08□□□□□ -1.92
Best3Q6H1V1 Gm36189-201ENSMUST00000204113 523 ntBASIC3.08□□□□□ -1.92
Best3Q6H1V1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm6025-201ENSMUST00000121517 201 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 n-R5s15-201ENSMUST00000122635 111 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm25914-201ENSMUST00000157618 153 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm26482-201ENSMUST00000158015 62 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm16111-201ENSMUST00000162128 285 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm25996-201ENSMUST00000175393 117 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Mir6925-201ENSMUST00000197857 70 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Best3Q6H1V1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.07□□□□□ -1.92
Best3Q6H1V1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Best3Q6H1V1 Gm22752-201ENSMUST00000102083 109 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm13756-201ENSMUST00000117618 222 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Best3Q6H1V1 Mir8090-201ENSMUST00000185078 136 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm28169-201ENSMUST00000190342 345 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm46993-201ENSMUST00000220708 259 ntBASIC3.06□□□□□ -1.92
Best3Q6H1V1 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm24890-201ENSMUST00000104389 102 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm15214-201ENSMUST00000122155 470 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm7209-201ENSMUST00000122339 333 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm24632-201ENSMUST00000122770 323 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm26411-201ENSMUST00000157668 107 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm24210-201ENSMUST00000158263 133 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm24082-201ENSMUST00000175175 83 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Gm23090-201ENSMUST00000177331 78 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Mir6386-201ENSMUST00000183558 104 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.05□□□□□ -1.92
Best3Q6H1V1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm8260-201ENSMUST00000119230 353 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm13560-201ENSMUST00000121865 329 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm22337-201ENSMUST00000157721 132 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Snord53-201ENSMUST00000175146 78 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm38183-201ENSMUST00000193189 205 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm25130-201ENSMUST00000082650 156 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Best3Q6H1V1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.04□□□□□ -1.92
Best3Q6H1V1 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm23655-201ENSMUST00000122627 105 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm23470-201ENSMUST00000157129 120 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm22651-201ENSMUST00000157872 94 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm18346-201ENSMUST00000216782 325 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm24762-201ENSMUST00000083689 104 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm25513-201ENSMUST00000083861 162 ntBASIC3.03□□□□□ -1.92
Best3Q6H1V1 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Best3Q6H1V1 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.03□□□□□ -1.93
Best3Q6H1V1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Best3Q6H1V1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Best3Q6H1V1 Gm25538-201ENSMUST00000101943 107 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 Gm25985-201ENSMUST00000122677 107 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 Gm22338-201ENSMUST00000157715 129 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 Gm27959-201ENSMUST00000185172 111 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 AC163289.1-201ENSMUST00000215919 262 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.02□□□□□ -1.93
Best3Q6H1V1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm26015-201ENSMUST00000104402 125 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm22586-201ENSMUST00000157507 122 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm22842-201ENSMUST00000157709 118 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm23665-201ENSMUST00000158054 62 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm42960-201ENSMUST00000202160 241 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Mir429-201ENSMUST00000083493 83 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Best3Q6H1V1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.01□□□□□ -1.93
Best3Q6H1V1 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms