Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm6952-201ENSMUST00000118629 159 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm22477-201ENSMUST00000122569 316 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm22281-201ENSMUST00000157198 103 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm24908-201ENSMUST00000157294 127 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Mir1951-201ENSMUST00000157981 89 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm26157-201ENSMUST00000158974 126 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm16111-201ENSMUST00000162128 285 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm43239-201ENSMUST00000200131 201 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm44052-201ENSMUST00000203382 396 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Gm8508-201ENSMUST00000061226 363 ntBASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Snord89-201ENSMUST00000104516 110 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm6025-201ENSMUST00000121517 201 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm15365-201ENSMUST00000122392 300 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm25625-201ENSMUST00000157221 96 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm24717-201ENSMUST00000157522 124 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm22483-201ENSMUST00000157986 274 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm22527-201ENSMUST00000158816 106 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Mir6405-201ENSMUST00000184584 124 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm44564-201ENSMUST00000207985 180 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Gm22507-201ENSMUST00000082773 160 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Mir186-201ENSMUST00000083497 71 ntBASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Shkbp1Q6P7W2 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm8260-201ENSMUST00000119230 353 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm24010-201ENSMUST00000157731 282 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Snord53-201ENSMUST00000175146 78 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm25464-201ENSMUST00000175481 107 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm23264-201ENSMUST00000083372 107 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm22681-201ENSMUST00000083853 106 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.72□□□□□ -1.97
Shkbp1Q6P7W2 Snord90-201ENSMUST00000104568 111 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Gm25253-201ENSMUST00000179958 107 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Gm23723-201ENSMUST00000082996 132 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.71□□□□□ -1.98
Shkbp1Q6P7W2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm24234-201ENSMUST00000104316 107 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm23886-201ENSMUST00000122684 313 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm26277-201ENSMUST00000157097 152 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm25642-201ENSMUST00000175137 66 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm37545-201ENSMUST00000186512 148 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Mir7118-201ENSMUST00000197760 61 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm15235-201ENSMUST00000200572 194 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Gm25589-201ENSMUST00000082502 166 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Mir127-201ENSMUST00000093568 70 ntBASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Shkbp1Q6P7W2 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm25728-201ENSMUST00000104525 159 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm24916-201ENSMUST00000157287 79 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm25059-201ENSMUST00000157367 117 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm24926-201ENSMUST00000178053 79 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm25020-201ENSMUST00000178071 107 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm22632-201ENSMUST00000178266 79 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm23933-201ENSMUST00000178405 79 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm24461-201ENSMUST00000082735 103 ntBASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shkbp1Q6P7W2 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Gm23655-201ENSMUST00000122627 105 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Gm25980-201ENSMUST00000157176 218 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Gm26160-201ENSMUST00000158965 63 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Mir3075-201ENSMUST00000175340 85 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Mir3969-201ENSMUST00000197106 92 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.68□□□□□ -1.98
Shkbp1Q6P7W2 Gm26493-201ENSMUST00000083155 136 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 167.1 ms