Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PdfS4R2K0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.07□□□□□ -0.32
PdfS4R2K0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Haglr-201ENSMUST00000100000 2085 ntBASIC13.07□□□□□ -0.32
PdfS4R2K0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PdfS4R2K0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PdfS4R2K0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PdfS4R2K0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.06□□□□□ -0.32
PdfS4R2K0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.06□□□□□ -0.32
PdfS4R2K0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.06□□□□□ -0.32
PdfS4R2K0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PdfS4R2K0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
PdfS4R2K0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.05□□□□□ -0.32
PdfS4R2K0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.05□□□□□ -0.32
PdfS4R2K0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.05□□□□□ -0.32
PdfS4R2K0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.05□□□□□ -0.32
PdfS4R2K0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PdfS4R2K0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PdfS4R2K0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PdfS4R2K0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
PdfS4R2K0 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms