Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1h3Q9Z0Y9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1h3Q9Z0Y9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm6623-201ENSMUST00000173570 544 ntBASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm10566-201ENSMUST00000086739 996 ntBASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Actl10-202ENSMUST00000226583 1501 ntBASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1h3Q9Z0Y9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm17971-201ENSMUST00000190239 806 ntBASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nr1h3Q9Z0Y9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Nr1h3Q9Z0Y9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms