Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ggps1Q9WTN0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ggps1Q9WTN0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ggps1Q9WTN0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.83■□□□□ 0.61
Ggps1Q9WTN0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Ggps1Q9WTN0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ggps1Q9WTN0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Gm15794-201ENSMUST00000120182 631 ntBASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ggps1Q9WTN0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ggps1Q9WTN0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ggps1Q9WTN0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ggps1Q9WTN0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ggps1Q9WTN0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms