Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Gm37935-201ENSMUST00000192012 982 ntBASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col13a1Q9R1N9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col13a1Q9R1N9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm26039-201ENSMUST00000158152 144 ntBASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm10566-201ENSMUST00000086739 996 ntBASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col13a1Q9R1N9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Mir770-201ENSMUST00000103252 94 ntBASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Olfr129-201ENSMUST00000122318 993 ntBASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col13a1Q9R1N9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms