Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Gm27459-201ENSMUST00000184860 107 ntBASIC14.85□□□□□ -0.03
Nubp1Q9R060 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nubp1Q9R060 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm5864-201ENSMUST00000202263 970 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.84□□□□□ -0.03
Nubp1Q9R060 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp1Q9R060 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp1Q9R060 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp1Q9R060 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp1Q9R060 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp1Q9R060 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Nubp1Q9R060 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nubp1Q9R060 AW822252-206ENSMUST00000208904 237 ntBASIC14.83□□□□□ -0.04
Nubp1Q9R060 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.83□□□□□ -0.04
Nubp1Q9R060 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp1Q9R060 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm13884-201ENSMUST00000118103 829 ntBASIC14.82□□□□□ -0.04
Nubp1Q9R060 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm45925-201ENSMUST00000218882 744 ntBASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.82□□□□□ -0.04
Nubp1Q9R060 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp1Q9R060 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms