Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Gm27321-201ENSMUST00000185021 205 ntBASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a4Q9QZR9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Mir3113-201ENSMUST00000175478 76 ntBASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col4a4Q9QZR9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.05■□□□□ 0.32
Col4a4Q9QZR9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a4Q9QZR9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a4Q9QZR9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.02■□□□□ 0.32
Col4a4Q9QZR9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms