Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Gm7213-201ENSMUST00000215977 950 ntBASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Actl10-202ENSMUST00000226583 1501 ntBASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Phtf1Q9QZ09 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Mir1668-201ENSMUST00000184114 107 ntBASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Phtf1Q9QZ09 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Phtf1Q9QZ09 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Phtf1Q9QZ09 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Phtf1Q9QZ09 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Phtf1Q9QZ09 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phtf1Q9QZ09 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phtf1Q9QZ09 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Gm22697-201ENSMUST00000175194 63 ntBASIC18.61■□□□□ 0.57
Phtf1Q9QZ09 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms