Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Gm15165-201ENSMUST00000118140 502 ntBASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Gm43514-201ENSMUST00000198852 424 ntBASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1fQ9JIS7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1fQ9JIS7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Gm11452-201ENSMUST00000122376 690 ntBASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Gm27525-201ENSMUST00000184465 107 ntBASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1fQ9JIS7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1fQ9JIS7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.26■□□□□ 0.67
Cacna1fQ9JIS7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cacna1fQ9JIS7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms