Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup50Q9JIH2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup50Q9JIH2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Nup50Q9JIH2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup50Q9JIH2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup50Q9JIH2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.9■□□□□ 0.46
Nup50Q9JIH2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup50Q9JIH2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms