Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Barx1Q9ER42 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.34■□□□□ 0.05
Barx1Q9ER42 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.34■□□□□ 0.05
Barx1Q9ER42 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Barx1Q9ER42 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Barx1Q9ER42 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Barx1Q9ER42 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Barx1Q9ER42 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Barx1Q9ER42 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Barx1Q9ER42 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Barx1Q9ER42 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.32■□□□□ 0.04
Barx1Q9ER42 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Barx1Q9ER42 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.31■□□□□ 0.04
Barx1Q9ER42 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Barx1Q9ER42 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Barx1Q9ER42 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Barx1Q9ER42 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Barx1Q9ER42 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Barx1Q9ER42 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.3■□□□□ 0.04
Barx1Q9ER42 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.3■□□□□ 0.04
Barx1Q9ER42 Gm43347-201ENSMUST00000200226 580 ntBASIC15.3■□□□□ 0.04
Barx1Q9ER42 Gm5864-201ENSMUST00000202263 970 ntBASIC15.3■□□□□ 0.04
Barx1Q9ER42 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.3■□□□□ 0.04
Barx1Q9ER42 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms