Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Gm10653-202ENSMUST00000139570 835 ntBASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc7Q9D541 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc7Q9D541 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Gm12085-201ENSMUST00000119263 940 ntBASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc7Q9D541 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc7Q9D541 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc7Q9D541 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms