Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx29Q9D3S3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx29Q9D3S3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx29Q9D3S3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx29Q9D3S3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Gm5864-201ENSMUST00000202263 970 ntBASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx29Q9D3S3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx29Q9D3S3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Gm13884-201ENSMUST00000118103 829 ntBASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Snx29Q9D3S3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Gm13312-201ENSMUST00000119631 718 ntBASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Rprl3-201ENSMUST00000157400 290 ntBASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snx29Q9D3S3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.61■□□□□ 0.57
Snx29Q9D3S3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snx29Q9D3S3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms